Evaluation of a duplex PCR assay for the detection of Salmonella spp. and Staphylococcus aureus in raw milk

Main Article Content

Yuneilys Aleli Martínez-García
Odalys Uffo-Reinoso
Yamilka Riverón-Alemán
José Antonio Agüero-Fernández
Ailin Martínez-Vasallo

Abstract

Infectious and toxigenic pathogens transmitted through food have been recognized as the cause of Foodborne Diseases (FBD). The main pathogens of concern are Salmonella spp. and Staphylococcus aureus. These bacteria are associated with acute gastrointestinal outbreaks caused by contaminated food. One of the causes of this contamination is the poor hygiene during the processing and handling of food. Foodborne outbreaks caused by milk and dairy products contaminated reach up to 6 %. The objective of the present work was to develop and standardize a duplex PCR assay for the detection of Salmonella spp. and Staphylococcus aureus in raw milk. The principle of the method is the simultaneous amplification of the genes yfiR for Salmonella spp. and ARNr 23S for Staphylococcus aureus. The thermodynamic properties of each primer were determined and the main critical parameters of the dPCR assay were optimized. The duplex PCR demonstrated its specificity for the target microorganisms and the detection limit of the assay was up to 1 pg/μL of DNA and 102 cfu/mL in unpasteurized milk. In the milk samples analyzed, 46.7 % were contaminated with S. aureus and none of the samples were positive to Salmonella spp. The results suggest that the developed duplex PCR is sensible and specific for the simultaneous detection of both pathogens from raw milk.

Article Details

How to Cite
1.
Martínez-García YA, Uffo-Reinoso O, Riverón-Alemán Y, Agüero-Fernández JA, Martínez-Vasallo A. Evaluation of a duplex PCR assay for the detection of Salmonella spp. and Staphylococcus aureus in raw milk. Rev. Salud Anim. [Internet]. 2018 Aug. 1 [cited 2024 Nov. 22];40(2). Available from: https://revistas.censa.edu.cu/index.php/RSA/article/view/961
Section
ARTÍCULOS ORIGINALES

References

WHO/FOS. WHO/FOS 15.02 Estimaciones de la OMS sobre la carga mundial de enfermedades de transmisión alimentaria. WHO/FOS. 2015.

Oliver SP, Jayarao BM, Almeida RA. Foodborne pathogens in milk and the dairy farm environment: food safety and public health implications. Foodborne Pathog Dis. 2005;2(2):115-29.

Labbé RG, García S. Guide to foodborne pathogens. 2013.

ECDC ECfDPaC. EU summary report on zoonoses, zoonotic agents and food-borne outbreaks 2016. EFSA Journal 2017;15(12):5077.

Addis Z, Kebede N, Sisay Z, Alemayehu H, Wubetie A, Kassa T. Prevalence and antimicrobial resistance of Salmonella isolated from lactating cows and in contact humans in dairy farms of Addis Ababa: a cross sectional study. BMC Infect Dis. 2011;11(1):222.

Jayarao BM, Donaldson SC, Straley BA, Sawant AA, Hegde NV, Brown J. A survey of foodborne pathogens in bulk tank milk and raw milk consumption among farm families in Pennsylvania. J Dairy Sci. 2006;89(7):2451-2458.

van Asselt ED, van der Fels-Klerx HJ, Marvin HJP, van Bokhorst-van de Veen H, Groot MN. Overview of Food Safety Hazards in the European Dairy Supply Chain. Compr Rev in Food Sci F. 2017;16(1):59-75.

D'amico DJ, Groves E, Donnelly CW. Low incidence of foodborne pathogens of concern in raw milk utilized for farmstead cheese production. J Food Protect. 2008;71(8):1580-1589.

Hill B, Smythe B, Lindsay D, Shepherd J. Microbiology of raw milk in New Zealand. Int JFood Microbiol. 2012;157(2):305-308.

de Oliveira LP, Barros LSS, Carneiro V, Cirqueira MG. Study of Staphylococcus aureus in raw and pasteurized milk consumed in the Reconcavo area of the State of Bahia, Brazil. J Food Process Technol. 2011;02(06).

Gillespie BE, Lewis MJ, Boonyayatra S, Maxwell ML, Saxton A, Oliver SP, et al. Evaluation of bulk tank milk microbiological quality of nine dairy farms in Tennessee. J Dairy Sci. 2012;95(8):4275-4279.

Martínez A, Villoch A, Ribot A, Montes de Oca N, Riverón Y, Ponce P. Calidad e inocuidad en la leche cruda de una cadena de producción de una provincia occidental de Cuba. Rev Salud Anim. 2015;37(2):79-85.

Mata G, Vanetti MC. Comparison of Conventional and Rapid Methods for Salmonella Detection in Artisanal Minas Cheese. J Food Res. 2012;1(3):178.

Cheng CY, Huang MJ, Chiu HC, Liou SM, Chou CC, Huang CC. Simultaneous detection of food pathogens, Staphylococcus aureus, Salmonella enterica, Bacillus cereus and Vibrio parahaemolyticus by multiplex real-time polymerase chain reaction. J Food Drug Anal. 2012;20(1):66-73.

Law JW, Ab Mutalib NS, Chan KG, Lee LH. Rapid methods for the detection of foodborne bacterial pathogens: principles, applications, advantages and limitations. Front Microbiol. 2015;5(770).

Lee N, Kwon KY, Oh SK, Chang HJ, Chun HS, Choi SW. A multiplex PCR assay for simultaneous detection of Escherichia coli O157:H7, Bacillus cereus, Vibrio parahaemolyticus, Salmonella spp., Listeria monocytogenes, and Staphylococcus aureus in Korean ready-to-eat food. Foodborne Pathog Dis. 2014;11(7):574-580.

Gwida MM, Al-Ashmawy MA. Culture versus PCR for Salmonella Species Identification in Some Dairy Products and Dairy Handlers with Special Concern to Its Zoonotic Importance. Vet Med International. 2014;2014:502370.

Botero R, Esteban J. Diagnóstico molecular del Staphylococcus aureus en leche de vacas afectada por mastitis. 2013.

ISO. ISO-16140. Microbiology of the food chain. Method validation. Part 2: Protocol for the validation of alternative (proprietary) methods against a reference method. ISO. 2016.

Nakasone KK, Peterson SW, Jong SC. Preservation and distribution of fungal cultures. 2004.

Ahmadi M, Rohani SMR, Ayremlou N. Detection of Staphylococcus aureus in milk by PCR. Comp Clin Pathol. 2010;19(1):91-94.

Kawasaki S, Horikoshi N, Okada Y, Takeshita K, Sameshima T, Kawamoto S. Multiplex PCR for simultaneous detection of Salmonella spp., Listeria monocytogenes, and Escherichia coli O157:H7 in meat samples. J Food Prot. 2005;68(3):551-556.

Cremonesi P, Luzzanaa M, Brascab M, Morandib S, Lodib R, Vimercatic C, et al. Development of a multiplex PCR assay for the identification of Staphylococcus aureus enterotoxigenic strains isolated from milk and dairy products. Mol Cell Probe. 2005;19:299-305.

Meiri-Bendek I, Lipkin E, Friedmann A, Leitner G, Saran A, Friedman S, et al. A PCR-Based Method for the Detectionof Streptococcus agalactiae in Milk. J Dairy Sci. 2002;85(7):1717-1723.

Pachon CDA. Aislamiento, identificación y serotipificación de Enterobacterias del género Salmonella. 2009.

Kim JH, Rhim SR, Kim KT, Paik HD, Lee JY. Simultaneous Detection of Listeria monocytogenes, Escherichia coli O157:H7, Bacillus cereus, Salmonella spp., and Staphylococcus aureus in Low-fatted Milk by Multiplex PCR. Korean J Food Sci An. 2014;34(5):717-723.

Cremonesi P, Castiglioni B, Malferrari G, Biunno I, Vimercati C, Moroni P, et al. Technical Note: Improved Method for Rapid DNA Extraction of Mastitis Pathogens Directly from Milk. J Dairy Sci. 2006;89(1):163-169.

Zhao X, Lin C-W, Wang J, Oh DH. Advances in rapid detection methods for foodborne pathogens. J Microbiol Biotechnol. 2014;24(3):297-312.

Markoulatos P, Siafakas N, Moncany M. Multiplex polymerase chain reaction: a practical approach. J Clinl Lab Anal. 2002;16(1):47-51.

Henegariu O, Heerema N, Dlouhy S, Vance G, Vogt P. Multiplex PCR: critical parameters and step-by-step protocol. Biotechniques. 1997;23(3):504-511.

Biolabs. Multiplex PCR Guidelines for Multiplex PCR 5X Master Mix. 2017.

Tsen HY, Liou JW, Lin CK. Possible use of a polymerase chain reaction method for specific detection of Salmonella in beef. J Fermentation Bioengineering. 1994;77(2):137-143.

D'Amico DJ, Donnelly CW. Microbiological quality of raw milk used for small-scale artisan cheese production in Vermont: effect of farm characteristics and practices. J Dairy Sci. 2010;93(1):134-147.

Kawasaki S, Fratamico PM, Horikoshi N, Okada Y, Takeshita K, Sameshima T, et al. Evaluation of a multiplex PCR system for simultaneous detection of Salmonella spp., Listeria monocytogenes, and Escherichia coli O157:H7 in foods and in food subjected to freezing. Foodborne Pathod Dis. 2009;6(1):81-89.

Jørgensen H, Mørk T, Høgåsen H, Rørvik L. Enterotoxigenic Staphylococcus aureus in bulk milk in Norway. J Appl Microbiol. 2005;99(1):158-166.

Gillespie BE, Oliver SP. Simultaneous Detection of Mastitis Pathogens, Staphylococcus aureus, Streptococcus uberis, and Streptococcus agalactiae by Multiplex Real-Time Polymerase Chain Reaction. J Dairy Sci. 2005;88(10):3510-3518.

OECD-FAO. OECD-FAO Agricultural Outlook 2016-2025. 2016:1-13.

Most read articles by the same author(s)